JuliaHealthZoo

An example zoo of various health research workflows using Julia and JuliaHealth tools.

🔬

Workflows

A growing collection of reproducible, end-to-end health data science workflows - from observational studies to medical imaging and geospatial analysis.

🏥

Patient-Level Prediction

Build a binary classification model from OMOP CDM cohorts using FunSQL.jl, DataFrames.jl, OHDSICohortExpressions.jl, MLJ etc, from raw data to model evaluation.

🗺️

Geospatial Health Informatics

Combine IPUMS census microdata with administrative boundary shapefiles to map population-level health indicators across regions using GeoMakie.jl.

🧲

MRI Simulation and Analysis

Simulate MRI acquisitions with KomaMRI.jl, reconstruct k-space data with MRIReco.jl, and interface BART from Julia via BartIO.jl and PythonCall.jl.